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    鳜致病性舒氏气单胞菌的生物学特性及基因组序列分析

    BIOLOGICAL CHARACTERISTICS AND GENOMIC SEQUENCE ANALYSIS OF PATHOGENIC AEROMONAS SCHUBERTII ISOLATED FROM MANDARIN FISH (SINIPERCA CHUATSI)

    • 摘要: 为探究鳜源舒氏气单胞菌(Aeromonas schubertii)的生物学特性和分子遗传特征, 分离患病鳜(饲喂人工配合饲料)的病原菌, 对编号为ZQ210705的分离菌株进行菌种鉴定、生物学特性研究、全基因组测序和遗传进化分析。通过16S rRNA、gyrB和全基因组测序分析及生理生化特征进行菌种鉴定。通过测定菌株的运动性、溶血活性、胞外酶活性、致病性和耐药性明确其生物学特性。通过全基因组测序分析分离菌株的多位点序列分型(Multilocus Sequence Typing, MLST)、毒力基因、耐药基因和遗传进化关系。分离菌株ZQ210705被鉴定为舒氏气单胞菌, 该菌具有运动性、β-溶血活性以及胞外蛋白酶、淀粉酶和脂肪酶活性, 对水产常用抗菌药物如恩诺沙星、氟苯尼考、新霉素、多西环素和甲氧苄啶+磺胺甲噁唑等敏感, 对鳜有较强的致病性, 其LD50为4.75×107 CFU/mL。全基因组测序分析发现菌株ZQ210705含有T2SS、T3SS和T6SS等分泌系统及多种毒力基因, 携带rsmAadeFfosGEF-TuqnrS2耐药基因, MLST为新的ST3589, 该菌与罗非鱼源舒氏气单胞菌LF1708具有更近的亲缘关系。从患病鳜体内分离一株舒氏气单胞菌ZQ210705, 该菌具有较强的运动性和致病性, 携带多种毒力基因和分泌系统, 该菌与罗非鱼源舒氏气单胞菌的亲缘关系最近, 表明舒氏气单胞菌具有跨物种传播能力。

       

      Abstract: To investigate the biological characteristics and molecular genetic features of Aeromonas schubertii isolated from mandarin fish, this study aimed to isolate pathogenic bacteria from diseased mandarin fish fed with artificial compound diet, identify the strain ZQ210705, and analyze its biological characteristics, whole-genome sequencing, and genetic evolutionary relationships. The strain ZQ210705 was identified based on 16S rRNA, gyrB, and whole genome sequence analysis as well as physiological and biochemical characteristics. The biological characteristics were analyzed by motility, hemolytic activity, extracellular enzyme activity, pathogenicity, and antimicrobial resistance. The MLST (Multilocus Sequence Typing) type, virulence genes, drug resistance genes, and genetic evolution of the strain were analyzed by whole genome sequencing. Strain ZQ210705 was identified as A. schubertii. This strain exhibited motility and β-hemolytic activity, and produced extracellular protease, amylase, and lipase. It was susceptible to several commonly used aquatic antimicrobial agents, including enrofloxacin, florfenicol, neomycin, doxycycline, and trimethoprim-sulfamethoxazole. It showed high pathogenicity to mandarin fish, with LD50 values of 4.75×107 CFU/mL. Whole-genome sequencing revealed the presence of type II (T2SS), type III (T3SS), and type VI (T6SS) secretion systems, along with multiple virulence-associated genes. Additionally, resistance genes including rsmA, adeF, fosG, EF-Tu, and qnrS2 were found in the genome of strain ZQ210705. The strain represents a novel sequence type (ST=3589) and shares a closer genetic relationship with the tilapia-derived A. schubertii strain LF1708 than with other known isolates. In conclusion, strain ZQ210705 was identified as A. schubertii. It exhibited strong motility and high pathogenicity, and carried a variety of virulence genes and secretion systems. Phylogenomic analysis confirmed its close genetic relatedness to the tilapia-derived strain LF1708, supporting potential interspecific transmission within aquaculture ecosystems. This study provides valuable insights into the pathogenic mechanisms of A. schubertii and provides evidence for its adaptability across farmed fish hosts.

       

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