青海湖裸鲤SLC41A1基因启动子活性分析及其在盐碱适应中的作用

ANALYSIS OF SLC41A1 GENE PROMOTER ACTIVITY IN GYMNOCYPRIS PRZEWALSKII AND ITS ROLE IN SALINE-ALKALINE STRESS RESPONSE

  • 摘要: 为系统解析青海湖裸鲤(Gymnocypris przewalskii)SLC41A1基因的功能和调控机制, 本研究首先从青海湖裸鲤基因组数据库中调取SLC41A1基因序列, 克隆其CDS和启动子序列, 对其所编码蛋白的结构特征和组织表达特异性进行了分析, 并检测了该基因响应盐碱胁迫的表达水平变化; 其次, 通过生信分析预测核心启动子、调控元件和转录因子结合位点等区域; 最后, 采用双荧光素酶报告基因系统, 检测启动子区域不同截短体的转录活性。结果表明: 青海湖裸鲤SLC41A1基因CDS区为1047 bp, 编码348个氨基酸, 其蛋白序列包含与跨膜转运相关的结构域, 在硬骨鱼类中较为保守; 盐碱胁迫后SLC41A1在青海湖裸鲤肾脏和肠组织中表达量显著上调, 说明其在裸鲤盐碱适应过程中发挥重要作用; 获得了SLC41A1基因2148 bp的启动子片段, 对不同截短体的转录激活检测发现, –334— –555区域转录活性强, 可能与该区域C/EBPα1p、HNF-1和Sp1等转录因子结合位点的密集分布有关。本研究揭示了SLC41A1基因及其调控序列在盐碱适应中的潜在作用, 为阐明青海湖裸鲤适应高原独特环境的分子机制提供了新的研究思路。

     

    Abstract: Gymnocypris przewalskii, an endemic migratory fish species in Qinghai Lake and its surrounding waters, is capable of adapting to the lake’s highly saline-alkaline environment. The solute carrier (SLC) family, as key membrane transport proteins, participates in numerous essential physiological and metabolic pathways and may play critical roles in the adaptation of G. przewalskii to saline-alkaline stress. To systematically elucidate the function and regulatory mechanisms of SLC41A1 in G. przewalskii, we first retrieved its sequence from the G. przewalskii genome database and cloned the coding sequence (CDS) and promoter region. We analyzed the structural features of the encoded protein, its tissue-specific expression patterns, and its transcriptional response to saline-alkaline stress. Subsequently, bioinformatic analyses were employed to predict core promoter regions, regulatory elements, and transcription factor binding sites. Finally, a dual-luciferase reporter assay was used to assess the transcriptional activity of various truncated promoter fragments. The CDS of SLC41A1 gene in G. przewalskii is 1047 bp in length, encoding a protein of 348 amino acids that contains transmembrane transport-related domains and exhibits high conservation among teleost fishes. Under saline-alkaline stress, SLC41A1 expression was significantly upregulated in kidney and intestinal tissues, indicating its role in environmental adaptation. A 2148-bp promoter fragment of SLC41A1 was obtained, within which a core promoter region and three potential key transcription factor binding sites (C/EBPα1p, HNF-1, and Sp1) were identified. Transcription assays revealed strong transcriptional activity in the region from –334 to –555 bp upstream of the transcription start site, likely due to the dense clustering of binding sites for C/EBPα1p, HNF-1, and Sp1. This study provides new insights into the potential role of SLC41A1 gene and its regulatory sequences in saline-alkaline adaptation, offering a foundation for further understanding the molecular mechanisms underlying G. przewalskii’s adaptation to the unique high-altitude environment of the Qinghai-Xizang Plateau.

     

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