| Citation: |
LI Zhi-gang, YANG Guan-pin, ZHU Yan-hong. THE RELATIONSHIP BETWEEN POLYMORPHISM OF BACTERIAL 16S rDNA RESTRICTION FRAGMENT LENGTH AND COMMUNITY STRUCTURE OF AQUATIC BACTERIA[J]. ACTA HYDROBIOLOGICA SINICA, 2001, 25(2): 111-115.
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Amann R I,Ludwig W,Schleifer K H.Phylogenetic identification and in situ detection of individual microbial cells without cultivation [J].Microbiology Reviews.1995,59:143—169[2] Marchesi J R,Sato T,Weightman A J,et al.Design and examination of useful bacterium specific PCR primers that amplify genes coding for bacterial 16S rRNA [J].Appl.Environ.Microbiol.,1998,64:795—799[3] Field K G,Gordon D,Wright T,et al.Diversity and depth specific distribution of SAR 11 cluster rRNA genes from marine planktonic bacteria [J].Appl.Environ.Microbiol.,1997,63:63—70[4] Wise M G,McArther J V,Shimkets L J.Bacterial diversity of a Carolina bay as determined by 16S rRNA gene analysis:Confirmation of novel taxa [J].Appl.Environ.Microbiol.,1997,63:1505—1514[5] Collins M D,East A K.Phylogeny and taxonomy of the food-borne pathogen Clostridium botulinum and its neurotoxins [J].J.of Appl.Mocrobiol.,1998,84:5—17[6] Laguerre G,Allard M R,Revoy F,et al.Rapid identification of rhizobia by restriction fragment length polymorphism analysis of PCR-amplified 16S rRNA genes [J].Appl.Environ.Microbiol.,1994,60:56—63[7] Brunel B,Givaudan A,Lanois A et al.Fast and accurate identification of Xenorhabdus and Photorhabdus species by restriction analysis of PCR-amplified 16S rRNA genes [J].Appl.Environ.Microbiol.,1997,63:574—580[8] 谭志远,陈文新.根瘤菌新类群的全细胞蛋白电泳及16S rDNA全序列分析[J].应用与环境生物学报,1998,4:65—69[9] Britschgi T B,Giovannoni S.Analysis of a natural marine bacterioplankton population by rRNA cloning and sequencing [J].Applied and Environmental Microbiology,1991,57:1707—1713[10] Lane D J,Field K G,Olsen G J,et al.Reverse transcriptase sequencing of ribosomal RNA for phylogenetic analysis [J].Methods Enzymol.,1998,167:138—144[11] 杨官品,朱艳红.土壤细菌基因资源的直接分离:16S核糖体RNA基因模式[J].湖北大学学报,1998,4:383—385[12] Yang G P,Saghai Maroof M A,Zhang Q F,et al.Comparative analysis of microsatellite DNA polymorphism in landraces and cultivars of rice [J].Mol.Gen.Genet.,1994,245:178—194[13] Southern E M.Measurement of DNA length by gel electrophoresis [J].Anal.Biochem.,1979,100:319—323[14] Wang H,Kohalmi S E,et al.An improved method for polymerase chain reaction using whole yeast cells [J].Analytical Biochemistry,1996,237:145—146[15] Redecker D,Thierfelder H,et al.Restriction analysis of PCR-amplified internal transcribed spacers of ribosomal DNA as a tool for species identification in different genera of the order glomals [J].Applied and Environmental Microbiology,1997,63:1756—1761
Amann R I,Ludwig W,Schleifer K H.Phylogenetic identification and in situ detection of individual microbial cells without cultivation [J].Microbiology Reviews.1995,59:143—169[2] Marchesi J R,Sato T,Weightman A J,et al.Design and examination of useful bacterium specific PCR primers that amplify genes coding for bacterial 16S rRNA [J].Appl.Environ.Microbiol.,1998,64:795—799[3] Field K G,Gordon D,Wright T,et al.Diversity and depth specific distribution of SAR 11 cluster rRNA genes from marine planktonic bacteria [J].Appl.Environ.Microbiol.,1997,63:63—70[4] Wise M G,McArther J V,Shimkets L J.Bacterial diversity of a Carolina bay as determined by 16S rRNA gene analysis:Confirmation of novel taxa [J].Appl.Environ.Microbiol.,1997,63:1505—1514[5] Collins M D,East A K.Phylogeny and taxonomy of the food-borne pathogen Clostridium botulinum and its neurotoxins [J].J.of Appl.Mocrobiol.,1998,84:5—17[6] Laguerre G,Allard M R,Revoy F,et al.Rapid identification of rhizobia by restriction fragment length polymorphism analysis of PCR-amplified 16S rRNA genes [J].Appl.Environ.Microbiol.,1994,60:56—63[7] Brunel B,Givaudan A,Lanois A et al.Fast and accurate identification of Xenorhabdus and Photorhabdus species by restriction analysis of PCR-amplified 16S rRNA genes [J].Appl.Environ.Microbiol.,1997,63:574—580[8] 谭志远,陈文新.根瘤菌新类群的全细胞蛋白电泳及16S rDNA全序列分析[J].应用与环境生物学报,1998,4:65—69[9] Britschgi T B,Giovannoni S.Analysis of a natural marine bacterioplankton population by rRNA cloning and sequencing [J].Applied and Environmental Microbiology,1991,57:1707—1713[10] Lane D J,Field K G,Olsen G J,et al.Reverse transcriptase sequencing of ribosomal RNA for phylogenetic analysis [J].Methods Enzymol.,1998,167:138—144[11] 杨官品,朱艳红.土壤细菌基因资源的直接分离:16S核糖体RNA基因模式[J].湖北大学学报,1998,4:383—385[12] Yang G P,Saghai Maroof M A,Zhang Q F,et al.Comparative analysis of microsatellite DNA polymorphism in landraces and cultivars of rice [J].Mol.Gen.Genet.,1994,245:178—194[13] Southern E M.Measurement of DNA length by gel electrophoresis [J].Anal.Biochem.,1979,100:319—323[14] Wang H,Kohalmi S E,et al.An improved method for polymerase chain reaction using whole yeast cells [J].Analytical Biochemistry,1996,237:145—146[15] Redecker D,Thierfelder H,et al.Restriction analysis of PCR-amplified internal transcribed spacers of ribosomal DNA as a tool for species identification in different genera of the order glomals [J].Applied and Environmental Microbiology,1997,63:1756—1761
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