CHENG Kai, ZHAO Yi-Jun, XIA Yan-Hua, ZHANG Ting. METHODS IN VIRIOPLANKTON AND THEIR APPLICATION[J]. ACTA HYDROBIOLOGICA SINICA, 2003, 27(5): 535-538.
Citation: CHENG Kai, ZHAO Yi-Jun, XIA Yan-Hua, ZHANG Ting. METHODS IN VIRIOPLANKTON AND THEIR APPLICATION[J]. ACTA HYDROBIOLOGICA SINICA, 2003, 27(5): 535-538.

METHODS IN VIRIOPLANKTON AND THEIR APPLICATION

  • Received Date: September 28, 2002
  • Rev Recd Date: October 17, 2002
  • Published Date: September 24, 2003
  • [1]
    Zhao Y J, Shi Z L, Huang G J, et al. Blue-green algal viruses(Cyanophage)[J]. Virologica Sinica, 1999,14(2):100-105.[赵以军,石正丽,黄国锦,等.蓝藻病毒(噬藻体)的研究进展 [J].中国病毒学,1999,14(2):100-105][2] Zhao Y J, Shi Z L. Viruses and virus-like particles of eukaryotic algae [J]. Virologica Sinica, 1996,11(2):93-100.[赵以军,石正丽.真核藻类的病毒和病毒类粒子(VLPs)[J].中国病毒学,1996,11(2):93-100][3] Wommack K E,Colwell R R. Virioplankton: Viruses in aquatic ecosystems[J]. Microbiology and Molecular Biology Reviews, 2000,64(1):1092-2172[4] Bergh O, orsheim K Y. Bratbak B G,et al.High abundance of viruses found in aquatic environments[J]. Nature,1989,340:467-468[5] Suttle C A. Infection of phytoplankton by viruses and reduction of primary productivity[J].Nature (London), 1990,347:467-469[6] Paul J H.,Rose J B, Jiang S C, et al. Coliphage and indigenous phage in Mamala Bay, Oahu, Hawaii [J]. Appl. Environ. Microbiol, 1997,63:133-138[7] Suttle C A. Enumeration and isolation of viruses [A]. Aquatic microbial ecology [C]. Boca Raton: Lewis Publishers, 1993,121-134[8] Suttle C A. Community structure: viruses[A]. Manual of environmental microbiology [C]. Washington DC: ASM Press, l997,272-277[9] Weinbauer M C., Suttle C A. Comparison of epifluorescence and transmission electron microscopy for counting viruses in natural marine waters[J]. Aquat. Microb. Ecol, 1997,13:225-232[10] Marie D, Brussard C P, Thyrhaug R, et al, Enumeration of marine viruses in culture and natural samples by flow cytometry[J]. Appl. Environ. Microbiol,1999,65:45-52[11] Noble R T, Fuhrman J A. Use of SYBR Green Ⅰ for rapid epifluorescence counts of marine viruses and bacteria[J]. Aquat. Microb. Ecol,1998,14:113-118[12] Xenopoulos M A, Bird D F. Virus a la sauce Yo-Pro:microwave-enhanced staining for counting viruses by epifluorescence microscopy[J]. Limnol. Oceanogr,1997,42:1648-1650[13] Hennes K P, Suttle C A. Direct counts of viruses in natural waters and laboratory cultures by epifluorescence microscopy[J]. Limnol. Oceanogr,1995,40:1050-1055[14] Bettarel Y, Sime-Ngando T, Amblard C, et al. A Comparison of Methods for Counting Viruses in Aquatic Systems[J]. Appl. Environ. Microbiol, 2000,2283-2289[15] Nuria G B, Kristine L, Carlos P A. Viral lysis and bacterivory during a phytoplankton bloom in a coastal water microcosm[J]. Appl. Environ. Microbiol, 1999,1949-1958[16] Chen F, Lu J R, Brian J B, et al. Application of digital image analysis and flow cytometry to enumerate marine viruses stained with SYBR Gold[J]. Appl. Environ. Microbiol, 2001,539-545[17] Li W K,Dickie P M. Monitoring phytoplankton,bacterioplankton, and virioplankton in a coastal inlet (Bedford Basin) by flow cytometry[J]. Cytometry, 2001,44(3):236-246[18] Proctor L M, Fuhrman J A. Viral mortality of marine bacteria and cyanobacteria[J]. Nature (London), 1990, 343:60-62[19] Proctor L M, Okubo A, Fuhrman J A. Calibrating estimates of phage-induced mortality in marine bacteria: ultrastructural studies of marine bacteriophage development from one-step growth experiments[J]. Microb. Ecol, 1993,25:161-182[20] Suttle C A. The significance of viruses to mortality in aquatic microbial communities[J]. Microb. Ecol, 1994,28:237-243[21] Steward G F,Wikner J, Cochlan W P,et al. Estimation of virus production in the sea. I. Method development. Mar. Microb. Food Webs, 1992,6:57-78[22] Wilkner J, Vallino J J, Steward G F,et al. Nucleic acids from the host bacterium as a major source of nucleotides for three marine bacteriophages[J]. FEMS Microbiol. Ecol, 1993,12:237-248[23] Noble R T, Fuhrman J A. Rapid virus production and removal as measured with fluorescently labeled viruses as tracers[J]. Appl. Environ. Microbiol, 2000,66(99):3790-3797[24] Steward G F, Smith D C, Azam F. Abundance and production of bacteria and viruses in the Bering and Chukchi seas[J]. Mar. Ecol. Prog. Ser, 1996,131:287-300[25] Bratbak G., Egge J K, Heldal M. Viral mortality of the marine alga Emiliania huxleyi (Haptophyceae) and termination of algal blooms[J]. Mar. Ecol. Prog. Ser, 1993,93:39-48[26] Heldal M, Bratbak G.. Production and decay of viruses in aquatic environments[J].Mar. Ecol. Prog. Ser, 1991,72:205-212[27] Suttle C A, Chan A M. Dynamics and distribution of cyanophages and their effect on marine Synechococcus spp[J].Appl. Environ. Microbiol, 1994,60:3167-3174[28] Chen F, Suttle C A, Short S M. Genetic diversity in marine algal virus communities as revealed by sequence analysis of DNA polymerase genes[J].Appl. Environ. Microbiol, 1996,62(8):2869-2874[29] Chen F, Suttle C A, Evolutionary relationships among large double-stranded DNA viruses that infect microalgae and other organisms as inferred from DNA polymerase genes[J].Virology, 1996,219(1):170-178[30] Wommack K E, Ravel J, Hill R T, et al. Hybridization analysis of chesapeake bay virioplankton[J].Appl. Environ. Microbiol,1999,65(1):241-250[31] Lim E L, Tomita A V, Thilly W G, et al. Combination of competitive quantitative PCR and constant-denaturant capillary electrophoresis for high-resolution detection and enumeration of microbial cells[J].Appl. Environ. Microbiol,2001,67(9):3897-3903[32] Zhang Q Y. Virioplankton[J].Acta Hydrobiologica Sinica, 2002,26(6):691-696.[张奇亚.浮游病毒水生生物学报,2002,26(6):691-696]

    Zhao Y J, Shi Z L, Huang G J, et al. Blue-green algal viruses(Cyanophage)[J]. Virologica Sinica, 1999,14(2):100-105.[赵以军,石正丽,黄国锦,等.蓝藻病毒(噬藻体)的研究进展 [J].中国病毒学,1999,14(2):100-105][2] Zhao Y J, Shi Z L. Viruses and virus-like particles of eukaryotic algae [J]. Virologica Sinica, 1996,11(2):93-100.[赵以军,石正丽.真核藻类的病毒和病毒类粒子(VLPs)[J].中国病毒学,1996,11(2):93-100][3] Wommack K E,Colwell R R. Virioplankton: Viruses in aquatic ecosystems[J]. Microbiology and Molecular Biology Reviews, 2000,64(1):1092-2172[4] Bergh O, orsheim K Y. Bratbak B G,et al.High abundance of viruses found in aquatic environments[J]. Nature,1989,340:467-468[5] Suttle C A. Infection of phytoplankton by viruses and reduction of primary productivity[J].Nature (London), 1990,347:467-469[6] Paul J H.,Rose J B, Jiang S C, et al. Coliphage and indigenous phage in Mamala Bay, Oahu, Hawaii [J]. Appl. Environ. Microbiol, 1997,63:133-138[7] Suttle C A. Enumeration and isolation of viruses [A]. Aquatic microbial ecology [C]. Boca Raton: Lewis Publishers, 1993,121-134[8] Suttle C A. Community structure: viruses[A]. Manual of environmental microbiology [C]. Washington DC: ASM Press, l997,272-277[9] Weinbauer M C., Suttle C A. Comparison of epifluorescence and transmission electron microscopy for counting viruses in natural marine waters[J]. Aquat. Microb. Ecol, 1997,13:225-232[10] Marie D, Brussard C P, Thyrhaug R, et al, Enumeration of marine viruses in culture and natural samples by flow cytometry[J]. Appl. Environ. Microbiol,1999,65:45-52[11] Noble R T, Fuhrman J A. Use of SYBR Green Ⅰ for rapid epifluorescence counts of marine viruses and bacteria[J]. Aquat. Microb. Ecol,1998,14:113-118[12] Xenopoulos M A, Bird D F. Virus a la sauce Yo-Pro:microwave-enhanced staining for counting viruses by epifluorescence microscopy[J]. Limnol. Oceanogr,1997,42:1648-1650[13] Hennes K P, Suttle C A. Direct counts of viruses in natural waters and laboratory cultures by epifluorescence microscopy[J]. Limnol. Oceanogr,1995,40:1050-1055[14] Bettarel Y, Sime-Ngando T, Amblard C, et al. A Comparison of Methods for Counting Viruses in Aquatic Systems[J]. Appl. Environ. Microbiol, 2000,2283-2289[15] Nuria G B, Kristine L, Carlos P A. Viral lysis and bacterivory during a phytoplankton bloom in a coastal water microcosm[J]. Appl. Environ. Microbiol, 1999,1949-1958[16] Chen F, Lu J R, Brian J B, et al. Application of digital image analysis and flow cytometry to enumerate marine viruses stained with SYBR Gold[J]. Appl. Environ. Microbiol, 2001,539-545[17] Li W K,Dickie P M. Monitoring phytoplankton,bacterioplankton, and virioplankton in a coastal inlet (Bedford Basin) by flow cytometry[J]. Cytometry, 2001,44(3):236-246[18] Proctor L M, Fuhrman J A. Viral mortality of marine bacteria and cyanobacteria[J]. Nature (London), 1990, 343:60-62[19] Proctor L M, Okubo A, Fuhrman J A. Calibrating estimates of phage-induced mortality in marine bacteria: ultrastructural studies of marine bacteriophage development from one-step growth experiments[J]. Microb. Ecol, 1993,25:161-182[20] Suttle C A. The significance of viruses to mortality in aquatic microbial communities[J]. Microb. Ecol, 1994,28:237-243[21] Steward G F,Wikner J, Cochlan W P,et al. Estimation of virus production in the sea. I. Method development. Mar. Microb. Food Webs, 1992,6:57-78[22] Wilkner J, Vallino J J, Steward G F,et al. Nucleic acids from the host bacterium as a major source of nucleotides for three marine bacteriophages[J]. FEMS Microbiol. Ecol, 1993,12:237-248[23] Noble R T, Fuhrman J A. Rapid virus production and removal as measured with fluorescently labeled viruses as tracers[J]. Appl. Environ. Microbiol, 2000,66(99):3790-3797[24] Steward G F, Smith D C, Azam F. Abundance and production of bacteria and viruses in the Bering and Chukchi seas[J]. Mar. Ecol. Prog. Ser, 1996,131:287-300[25] Bratbak G., Egge J K, Heldal M. Viral mortality of the marine alga Emiliania huxleyi (Haptophyceae) and termination of algal blooms[J]. Mar. Ecol. Prog. Ser, 1993,93:39-48[26] Heldal M, Bratbak G.. Production and decay of viruses in aquatic environments[J].Mar. Ecol. Prog. Ser, 1991,72:205-212[27] Suttle C A, Chan A M. Dynamics and distribution of cyanophages and their effect on marine Synechococcus spp[J].Appl. Environ. Microbiol, 1994,60:3167-3174[28] Chen F, Suttle C A, Short S M. Genetic diversity in marine algal virus communities as revealed by sequence analysis of DNA polymerase genes[J].Appl. Environ. Microbiol, 1996,62(8):2869-2874[29] Chen F, Suttle C A, Evolutionary relationships among large double-stranded DNA viruses that infect microalgae and other organisms as inferred from DNA polymerase genes[J].Virology, 1996,219(1):170-178[30] Wommack K E, Ravel J, Hill R T, et al. Hybridization analysis of chesapeake bay virioplankton[J].Appl. Environ. Microbiol,1999,65(1):241-250[31] Lim E L, Tomita A V, Thilly W G, et al. Combination of competitive quantitative PCR and constant-denaturant capillary electrophoresis for high-resolution detection and enumeration of microbial cells[J].Appl. Environ. Microbiol,2001,67(9):3897-3903[32] Zhang Q Y. Virioplankton[J].Acta Hydrobiologica Sinica, 2002,26(6):691-696.[张奇亚.浮游病毒水生生物学报,2002,26(6):691-696]
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